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    New at CFDE Training

    Explore our latest tutorial additions and discover lessons across a broad spectrum of technical topics.

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    GWAS in the Cloud

    Analyse genetic variants to obtain correlations to phenotypes and visualize using a Manhattan plot.

    Get Started
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    RNA-Seq on Cavatica

    Learn to perform differential gene expression analysis using Kids First cancer cohorts on Cavatica cloud platform.

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    Amazon Web Services

    Learn to connect, setup and conduct analysis using Amazon's cloud computing services.

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    Google Cloud Platform

    Learn to setup, download NCBI's SRA datasets and conduct analysis using Google's cloud computing services.

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    Snakemake Workflows

    Learn to create reproducible and scalable data analyses using the snakemake workflow management system.

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    Conda Manager

    Discover the use of conda for managing virtual environments and software package installations for streamlined, versioned and reproducible workflows.

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Welcome to CFDE Training Resources!

We are working to make Common Fund data more accessible to researchers and clinicians like you!

Choose from our growing list of tutorials and resources to learn how to perform bioinformatic analyses and access data.


Check out our events calendar for upcoming workshops !

Past workshops:

August 4, 2021  •  Virtual Workshop

August 3, 2021  •  Virtual Workshop

July 28, 2021  •  Virtual Workshop

July 21, 2021  •  Virtual Workshop

July 14, 2021  •  Virtual Workshop

June 30, 2021  •  Virtual Workshop

June 21 & 23, 2021  •  Virtual Workshop

June 16, 2021  •  Pop-up Workshop

June 9, 2021  •  Virtual Workshop

June 2, 2021  •  Virtual Workshop

CFDE Portal Demo
May 26, 2021  •  Pop-up Workshop

May 12 & 14, 2021  •  Virtual Workshop

April 28, 2021  •  Virtual Workshop

April 22, 2021  •  Virtual Workshop

April 21, 2021  •  Virtual Workshop

April 14, 2021  •  Pop-up Workshop

April 7, 2021  •  Virtual Workshop

March 18, 2021  •  Virtual Workshop

March 4, 2021  •  Virtual Workshop

Feb 25, 2021  •  Virtual Workshop

Jan 29, 2021  •  Virtual Workshop

Introduction to the Kids First Data Resource Portal
Dec 17, 2020  •  Virtual Workshop
Workshop Resources:  Setup  •  Explore  •  Queries

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About CFDE

The Common Fund Data Ecosystem (CFDE) Coordination Center (CC) is a NIH Common Fund effort to identify and solve issues that inhibit data access and reuse across Common Fund programs.

By connecting the data and making them more accessible, the CFDE aims to enable novel scientific research that was not possible before, including hypothesis generation, discovery, and validation.